PoplarV1, Main, Exploration, bibRecord, 001393

Expression analysis of genes encoding double B-box zinc finger proteins in maize.

Identifieur interne : 001393 ( Main/Exploration ); précédent : 001392; suivant : 001394

Expression analysis of genes encoding double B-box zinc finger proteins in maize.

Auteurs : Wenlan Li [République populaire de Chine] ; Jingchao Wang [République populaire de Chine] ; Qi Sun [République populaire de Chine] ; Wencai Li [République populaire de Chine] ; Yanli Yu [République populaire de Chine] ; Meng Zhao [République populaire de Chine] ; Zhaodong Meng [République populaire de Chine]

Source :

Functional & integrative genomics [ 1438-7948 ] ; 2017.

RBID : pubmed:28480497

Descripteurs français

KwdFr :
- ARN messager (génétique), ARN messager (métabolisme), Doigts de zinc (MeSH), Protéines de répression (composition chimique), Protéines de répression (génétique), Protéines de répression (métabolisme), Protéines végétales (composition chimique), Protéines végétales (génétique), Protéines végétales (métabolisme), Régulation de l'expression des gènes au cours du développement (MeSH), Régulation de l'expression des gènes végétaux (MeSH), Zea mays (croissance et développement), Zea mays (génétique).
MESH :
- composition chimique : Protéines de répression, Protéines végétales.
- croissance et développement : Zea mays.
- génétique : ARN messager, Protéines de répression, Protéines végétales, Zea mays.
- métabolisme : ARN messager, Protéines de répression, Protéines végétales.
- Doigts de zinc, Régulation de l'expression des gènes au cours du développement, Régulation de l'expression des gènes végétaux.

English descriptors

KwdEn :
- Gene Expression Regulation, Developmental (MeSH), Gene Expression Regulation, Plant (MeSH), Plant Proteins (chemistry), Plant Proteins (genetics), Plant Proteins (metabolism), RNA, Messenger (genetics), RNA, Messenger (metabolism), Repressor Proteins (chemistry), Repressor Proteins (genetics), Repressor Proteins (metabolism), Zea mays (genetics), Zea mays (growth & development), Zinc Fingers (MeSH).
MESH :
- chemical , chemistry : Plant Proteins, Repressor Proteins.
- chemical , genetics : Plant Proteins, RNA, Messenger, Repressor Proteins.
- chemical , metabolism : Plant Proteins, RNA, Messenger, Repressor Proteins.
- genetics : Zea mays.
- growth & development : Zea mays.
- Gene Expression Regulation, Developmental, Gene Expression Regulation, Plant, Zinc Fingers.

Abstract

The B-box proteins play key roles in plant development. The double B-box (DBB) family is one of the subfamily of the B-box family, with two B-box domains and without a CCT domain. In this study, 12 maize double B-box genes (ZmDBBs) were identified through a genome-wide survey. Phylogenetic analysis of DBB proteins from maize, rice, Sorghum bicolor, Arabidopsis, and poplar classified them into five major clades. Gene duplication analysis indicated that segmental duplications made a large contribution to the expansion of ZmDBBs. Furthermore, a large number of cis-acting regulatory elements related to plant development, response to light and phytohormone were identified in the promoter regions of the ZmDBB genes. The expression patterns of the ZmDBB genes in various tissues and different developmental stages demonstrated that ZmDBBs might play essential roles in plant development, and some ZmDBB genes might have unique function in specific developmental stages. In addition, several ZmDBB genes showed diurnal expression pattern. The expression levels of some ZmDBB genes changed significantly under light/dark treatment conditions and phytohormone treatments, implying that they might participate in light signaling pathway and hormone signaling. Our results will provide new information to better understand the complexity of the DBB gene family in maize.

DOI: 10.1007/s10142-017-0562-z
PubMed: 28480497

Affiliations:

République populaire de Chine

Links toward previous steps (curation, corpus...)

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Le document en format XML

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<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Gene Expression Regulation, Developmental (MeSH)</term>
<term>Gene Expression Regulation, Plant (MeSH)</term>
<term>Plant Proteins (chemistry)</term>
<term>Plant Proteins (genetics)</term>
<term>Plant Proteins (metabolism)</term>
<term>RNA, Messenger (genetics)</term>
<term>RNA, Messenger (metabolism)</term>
<term>Repressor Proteins (chemistry)</term>
<term>Repressor Proteins (genetics)</term>
<term>Repressor Proteins (metabolism)</term>
<term>Zea mays (genetics)</term>
<term>Zea mays (growth & development)</term>
<term>Zinc Fingers (MeSH)</term>
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<keywords scheme="KwdFr" xml:lang="fr"><term>ARN messager (génétique)</term>
<term>ARN messager (métabolisme)</term>
<term>Doigts de zinc (MeSH)</term>
<term>Protéines de répression (composition chimique)</term>
<term>Protéines de répression (génétique)</term>
<term>Protéines de répression (métabolisme)</term>
<term>Protéines végétales (composition chimique)</term>
<term>Protéines végétales (génétique)</term>
<term>Protéines végétales (métabolisme)</term>
<term>Régulation de l'expression des gènes au cours du développement (MeSH)</term>
<term>Régulation de l'expression des gènes végétaux (MeSH)</term>
<term>Zea mays (croissance et développement)</term>
<term>Zea mays (génétique)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en"><term>Plant Proteins</term>
<term>Repressor Proteins</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Plant Proteins</term>
<term>RNA, Messenger</term>
<term>Repressor Proteins</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Plant Proteins</term>
<term>RNA, Messenger</term>
<term>Repressor Proteins</term>
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<keywords scheme="MESH" qualifier="composition chimique" xml:lang="fr"><term>Protéines de répression</term>
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<term>Gene Expression Regulation, Plant</term>
<term>Zinc Fingers</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Doigts de zinc</term>
<term>Régulation de l'expression des gènes au cours du développement</term>
<term>Régulation de l'expression des gènes végétaux</term>
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<front><div type="abstract" xml:lang="en">The B-box proteins play key roles in plant development. The double B-box (DBB) family is one of the subfamily of the B-box family, with two B-box domains and without a CCT domain. In this study, 12 maize double B-box genes (ZmDBBs) were identified through a genome-wide survey. Phylogenetic analysis of DBB proteins from maize, rice, Sorghum bicolor, Arabidopsis, and poplar classified them into five major clades. Gene duplication analysis indicated that segmental duplications made a large contribution to the expansion of ZmDBBs. Furthermore, a large number of cis-acting regulatory elements related to plant development, response to light and phytohormone were identified in the promoter regions of the ZmDBB genes. The expression patterns of the ZmDBB genes in various tissues and different developmental stages demonstrated that ZmDBBs might play essential roles in plant development, and some ZmDBB genes might have unique function in specific developmental stages. In addition, several ZmDBB genes showed diurnal expression pattern. The expression levels of some ZmDBB genes changed significantly under light/dark treatment conditions and phytohormone treatments, implying that they might participate in light signaling pathway and hormone signaling. Our results will provide new information to better understand the complexity of the DBB gene family in maize.</div>
</front>
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<DateCompleted><Year>2018</Year>
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<Day>03</Day>
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<Abstract><AbstractText>The B-box proteins play key roles in plant development. The double B-box (DBB) family is one of the subfamily of the B-box family, with two B-box domains and without a CCT domain. In this study, 12 maize double B-box genes (ZmDBBs) were identified through a genome-wide survey. Phylogenetic analysis of DBB proteins from maize, rice, Sorghum bicolor, Arabidopsis, and poplar classified them into five major clades. Gene duplication analysis indicated that segmental duplications made a large contribution to the expansion of ZmDBBs. Furthermore, a large number of cis-acting regulatory elements related to plant development, response to light and phytohormone were identified in the promoter regions of the ZmDBB genes. The expression patterns of the ZmDBB genes in various tissues and different developmental stages demonstrated that ZmDBBs might play essential roles in plant development, and some ZmDBB genes might have unique function in specific developmental stages. In addition, several ZmDBB genes showed diurnal expression pattern. The expression levels of some ZmDBB genes changed significantly under light/dark treatment conditions and phytohormone treatments, implying that they might participate in light signaling pathway and hormone signaling. Our results will provide new information to better understand the complexity of the DBB gene family in maize.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Li</LastName>
<ForeName>Wenlan</ForeName>
<Initials>W</Initials>
<AffiliationInfo><Affiliation>Maize Research Institute, National Engineering Laboratory of Wheat and Maize, Key Laboratory of Biology and Genetic Improvement of Maize in Northern Yellow-huai River Plain, Ministry of Agriculture, Shandong Academy of Agricultural Sciences, Jinan, Shandong, 250100, People's Republic of China.</Affiliation>
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<Author ValidYN="Y"><LastName>Li</LastName>
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<ForeName>Yanli</ForeName>
<Initials>Y</Initials>
<AffiliationInfo><Affiliation>Maize Research Institute, National Engineering Laboratory of Wheat and Maize, Key Laboratory of Biology and Genetic Improvement of Maize in Northern Yellow-huai River Plain, Ministry of Agriculture, Shandong Academy of Agricultural Sciences, Jinan, Shandong, 250100, People's Republic of China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Zhao</LastName>
<ForeName>Meng</ForeName>
<Initials>M</Initials>
<AffiliationInfo><Affiliation>Maize Research Institute, National Engineering Laboratory of Wheat and Maize, Key Laboratory of Biology and Genetic Improvement of Maize in Northern Yellow-huai River Plain, Ministry of Agriculture, Shandong Academy of Agricultural Sciences, Jinan, Shandong, 250100, People's Republic of China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Meng</LastName>
<ForeName>Zhaodong</ForeName>
<Initials>Z</Initials>
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Expression analysis of genes encoding double B-box zinc finger proteins in maize.

Expression analysis of genes encoding double B-box zinc finger proteins in maize.

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